Data-Sets in Oncopression


Download as oncopression_dataset.xls
Download as oncopression_dataset.xlsx

TissueGroupdataIdTotalSampleNUsedSampleNGroupIsMatchedControlReferencePMIDSeriesTitle
ADRENAL.CANCER__CANCER-LIKEGSE2847687CANCER-LIKE21565795Characterization of differential gene expression in adrenocortical tumors harbouring β-catenin (CTNNB1) mutations.
ADRENAL.CANCER__CANCER-LIKEE-TABM-31110768CANCER-LIKE19139432Transcription profiling by array of human adrenocortical tumors to identify molecular predictors of diagnosis and prognosis
ADRENAL.CANCER__CANCER-LIKEGSE8514159CANCER-LIKE17911395Expression data from normal adrenal gland and aldosterone-producing adenoma
ADRENAL.CANCER__CANCERGSE123683428CANCER19218281Analysis of adrenocortical tumors identify IGF2 and Ki-67 as useful in differentiating carcinomas from adenomas
ADRENAL.CANCER__CANCERGSE197504844CANCER24238056Adrenocortical Carcinoma Gene Expression Profiling [Affymetrix]
ADRENAL.CANCER__CANCERE-TABM-31110734CANCER19139432Transcription profiling by array of human adrenocortical tumors to identify molecular predictors of diagnosis and prognosis
ADRENAL.CANCER__CANCERGSE333716555CANCER22800756Beta-catenin status effects in human adrenocortical carcinomas (33), adenomas (22), and normal adrenal cortex (10)
ADRENAL.CANCER__NORMALGSE12368346NORMAL-19218281Analysis of adrenocortical tumors identify IGF2 and Ki-67 as useful in differentiating carcinomas from adenomas
ADRENAL.CANCER__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
ADRENAL.CANCER__NORMALGSE19750484NORMAL-24238056Adrenocortical Carcinoma Gene Expression Profiling [Affymetrix]
ADRENAL.CANCER__NORMALE-TABM-3111074NORMAL-19139432Transcription profiling by array of human adrenocortical tumors to identify molecular predictors of diagnosis and prognosis
ADRENAL.CANCER__NORMALGSE8514154NORMAL-17911395Expression data from normal adrenal gland and aldosterone-producing adenoma
ADRENAL.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
ADRENAL.CANCER__NORMALGSE333716510NORMAL-22800756Beta-catenin status effects in human adrenocortical carcinomas (33), adenomas (22), and normal adrenal cortex (10)
BILE.DUCT.CANCER__CANCERGSE394093215CANCER-Gene expression profiling of ampullary carcinomas classifies ampullary carcinomas into biliary-like and intestinal-like subtypes that are prognostic of outcome
BLADDER.CANCER__CANCERE-MTAB-180317185CANCER-Bladder-RI
BLADDER.CANCER__CANCERGSE316849392CANCER22228636;24486590Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer  
BLADDER.CANCER__CANCERE-MTAB-19408782CANCER-Expression profil of non-muscle invasive (superficial) bladder carcinoma
BLADDER.CANCER__NORMALGSE11783166NORMAL-19400928Gene expression profile of bladder tissue of patients with ulcerative interstitial cystitis
BLADDER.CANCER__NORMALE-MTAB-1940874NORMAL--Expression profil of non-muscle invasive (superficial) bladder carcinoma
BRAIN.TUMOR__CANCERGSE374187676CANCER22722829Novel mutations target distinct subgroups of medulloblastoma.
BRAIN.TUMOR__CANCERGSE449715848CANCER23660940Gene expression data from pilocytic astrocytoma tumour samples and normal cerebellum controls
BRAIN.TUMOR__CANCERGSE28173030CANCER17140431Wavelet modelling of microarray data provides chromosomal pattern of expression which predicts survival in gliomas
BRAIN.TUMOR__CANCERGSE354937118CANCER23382118Pediatric rhabdoid tumors of kidney and brain show many differences in gene expression but share dysregulation of cell cycle and epigenetic effector genes
BRAIN.TUMOR__CANCERGSE64415209209CANCER25965575Gene expression data from ependymal tumor samples
BRAIN.TUMOR__CANCERGSE492437373CANCER24871706;24651015;25024229Gene expression data from medulloblastoma tumor samples
BRAIN.TUMOR__CANCERGSE158244530CANCER21406405Gene expression profiling of human gliomas and human glioblastoma cell lines
BRAIN.TUMOR__CANCERGSE297967252CANCER23727239Transcriptional Differences between Normal and Glioma-Derived Glial Progenitor Cells Identify a Core Set of Dysregulated Genes.
BRAIN.TUMOR__CANCERGSE2424488CANCER21102433Gene expression profiling of four subpopulations in GBM
BRAIN.TUMOR__CANCERGSE129924040CANCER19197950Beta-catenin status in pediatric medulloblastomas
BRAIN.TUMOR__CANCERGSE1957820953CANCER20479398;21659463Integrated molecular genetic profiling of pediatric-high grade gliomas reveals key differences with adult disease
BRAIN.TUMOR__CANCERGSE459212222CANCER23869222Expression data from human glioma tissues
BRAIN.TUMOR__CANCERGSE194042423CANCER23591193;23887970Gene expression analysis of primitive neuroectodermal tumors
BRAIN.TUMOR__CANCERGSE432894040CANCER20484145Gene expression profiles of gliomas with Affymetrix Human Genome U133 Plus 2.0 Array
BRAIN.TUMOR__CANCERGSE282384040CANCER23947815Low grade gliomas
BRAIN.TUMOR__CANCERE-TABM-8985756CANCER-Transcription profiling of human glioblastomas (56 tumor samples)
BRAIN.TUMOR__CANCERGSE348242718CANCER22286061Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
BRAIN.TUMOR__CANCERGSE91713012CANCER18394558Expression profiles of human glioblastoma frozen tumors and cell lines
BRAIN.TUMOR__CANCERGSE1214122CANCER-Metastasizing anaplasic ependymoma in an adult
BRAIN.TUMOR__CANCERGSE42901809CANCER16616334Expression data of glioma samples from Henry Ford Hospital
BRAIN.TUMOR__CANCERGSE56754141CANCER17283119Pilocytic astrocytoma
BRAIN.TUMOR__CANCERE-MTAB-9512522CANCER-Genome and transcriptome study of the response to irinotecan and bevacizumab in recurrent glioblastomas (CIT - Homo sapiens - BEVA)
BRAIN.TUMOR__CANCERGSE537337070CANCER24615357Expression data from primary Glioblastoma in adults
BRAIN.TUMOR__CANCERGSE32374213CANCER22711608Clinical and Molecular Characteristics of Congenital Glioblastoma Multiforme
BRAIN.TUMOR__CANCERGSE2657612635CANCER21931021Genome-wide Analyses of Diffuse Intrinsic Pontine Gliomas
BRAIN.TUMOR__CANCERGSE66354149136CANCER25968456Investigation of the mechansim underlying the inflammatory phenotype in Group A ependymoma
BRAIN.TUMOR__CANCERGSE76968410CANCER18565887;21642372Glioblastoma from a homogenous cohort of patients treated within clinical trial
BRAIN.TUMOR__CANCERGSE19728214CANCER21836821Expression data from different grades (WHO) of astrocytomas (ACM)
BRAIN.TUMOR__CANCERE-MTAB-18524316CANCER-High-through put translational in vivo and ex vivo techniques for glioma molecular characterization and accurate classification, prognosis and treatment selection subset data from etumour consorteum Kal1
BRAIN.TUMOR__CANCERGSE238069212CANCER21294158;18037961;25543125Expression data of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors
BRAIN.TUMOR__CANCERGSE362454636CANCER23079654Gene expression data from glioblastoma tumor samples
BRAIN.TUMOR__CANCERGSE1304126726CANCER18940004Gene expression analysis of glioblastomas identifies the major molecular basis for the prognostic benefit of younger age
BRAIN.TUMOR__CANCERGSE45361013CANCER16697959Tumor stem cells more closely mirror the phenotype and genotype of primary human tumors than do cancer cell lines
BRAIN.TUMOR__CANCERGSE21354181CANCER21836821gene expression profiling of three type of grade II gliomas
BRAIN.TUMOR__CANCERGSE61374137137CANCER25783747Expression data from cerebral tumors of WHO grade II and III
BRAIN.TUMOR__CANCERGSE5016113022CANCER24078694Expression data from human brain tumors and human normal brain
BRAIN.TUMOR__CANCERGSE103276262CANCER18769486mRNA expression data of 62 human medulloblastoma tumors
BRAIN.TUMOR__CANCERGSE503856510CANCER-Expression data from human ependymoma
BRAIN.TUMOR__NORMALGSE44971589NORMAL-23660940Gene expression data from pilocytic astrocytoma tumour samples and normal cerebellum controls
BRAIN.TUMOR__NORMALGSE35493711NORMAL-23382118Pediatric rhabdoid tumors of kidney and brain show many differences in gene expression but share dysregulation of cell cycle and epigenetic effector genes
BRAIN.TUMOR__NORMALGSE15824455NORMAL-21406405Gene expression profiling of human gliomas and human glioblastoma cell lines
BRAIN.TUMOR__NORMALGSE48350253173NORMAL-18832152;23273601;22824372;20838618;23999428;23206327Alzheimer's Disease Dataset
BRAIN.TUMOR__NORMALGSE43346707NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
BRAIN.TUMOR__NORMALGSE19404241NORMAL-23591193;23887970Gene expression analysis of primitive neuroectodermal tumors
BRAIN.TUMOR__NORMALGSE135644444NORMAL-19457239Gene expression in the human prefrontal cortex during postnatal development
BRAIN.TUMOR__NORMALGSE528116174NORMAL-17077275;18332434Alzheimer's disease and the normal aged brain (steph-affy-human-433773)
BRAIN.TUMOR__NORMALGSE7307677174NORMAL--Human body index - transcriptional profiling
BRAIN.TUMOR__NORMALGSE28160359NORMAL-21909266Significant Effects of Antiretroviral Therapy on Global Gene Expression in Brain Tissues of Patients with HIV-Associated Neurocognitive Disorders
BRAIN.TUMOR__NORMALGSE219354219NORMAL-21538462Comparison of post-mortem tissue from Brodman Brain BA22 region between schizophrenic and control patients
BRAIN.TUMOR__NORMALGSE47572010NORMALO16242812Alzheimer’s disease: neurofibrillary tangles (Rogers-3U24NS043571-01S1)
BRAIN.TUMOR__NORMALGSE358647218NORMAL-23049970The National NeuroAIDS Tissue Consortium Brain Gene Array: Two types of HIV-associated neurocognitive impairment
BRAIN.TUMOR__NORMALGSE7621258NORMAL-17571925Expression data of substantia nigra from postmortem human brain of Parkinson's disease patients (PD)
BRAIN.TUMOR__NORMALGSE265761262NORMALO21931021Genome-wide Analyses of Diffuse Intrinsic Pontine Gliomas
BRAIN.TUMOR__NORMALE-MTAB-307355128NORMAL-19208739Molecular Analysis of Brain Neoplasia
BRAIN.TUMOR__NORMALGSE6635414913NORMAL-25968456Investigation of the mechansim underlying the inflammatory phenotype in Group A ependymoma
BRAIN.TUMOR__NORMALGSE352635346NORMAL-16572319Comparison of gene expression profiles across the normal human body
BRAIN.TUMOR__NORMALGSE186961212NORMAL-19922771Comparison of human lower and upper entorhinal cortex layers gene expression
BRAIN.TUMOR__NORMALGSE19728214NORMAL-21836821Expression data from different grades (WHO) of astrocytomas (ACM)
BRAIN.TUMOR__NORMALGSE538904141NORMAL-24670762REST and Stress Resistance in Aging and Alzheimer’s Disease
BRAIN.TUMOR__NORMALGSE21354184NORMAL-21836821gene expression profiling of three type of grade II gliomas
BREAST.CANCER__CANCERGSE294316654CANCER-Identifying breast cancer biomarkers
BREAST.CANCER__CANCERGSE207119088CANCER21910250Epigenetic portraits of human breast cancers (expression data)
BREAST.CANCER__CANCERGSE214221914CANCER21314937Expression profiling of human DCIS and invasive ductal breast carcinoma
BREAST.CANCER__CANCERGSE75152611CANCER19666588Gene expression data from cancer mammospheres and bulk tumors
BREAST.CANCER__CANCERGSE435022525CANCER23549873Identification of Prognosis-Relevant Subgroups in Patients with Chemoresistant Triple Negative Breast Cancer
BREAST.CANCER__CANCERGSE50948156156CANCER24443618Expression Data from transNOAH breast cancer trial
BREAST.CANCER__CANCERGSE225442016CANCER20799942Integration of transcript expression, copy number and LOH analysis of infiltrating ductal carcinoma of the breast: expression analysis
BREAST.CANCER__CANCERGSE225132828CANCER20068102;21633166;20878462Markers of Taxane Sensitivity in Breast Cancer
BREAST.CANCER__CANCERGSE108105831CANCER20029976Gene expression signatures in breast cancer distinguish phenotype charact., histological subtypes, and tumor invasivness
BREAST.CANCER__CANCERGSE288218989CANCER21633166Laser-capture microdissected invasive micropapillary carcinomas of the breast
BREAST.CANCER__CANCERGSE235935050CANCER20368555Intratumor Heterogeneity and Precision of Microarray-Based Predictors of Breast Cancer Biology and Clinical Outcome
BREAST.CANCER__CANCERGSE653274187CANCER17401012;18498629;20479250Definition of clinically distinct molecular subtypes in estrogen receptor positive breast carcinomas using genomic grade
BREAST.CANCER__CANCERGSE336582222CANCER21792626A phase II neoadjuvant trial of anastrozole (A), fulvestrant (F) and gefitinib (I - iressa) in patients with newly diagnosed estrogen receptor positive breast cancer
BREAST.CANCER__CANCERGSE12276204203CANCER19421193Expression data from primary breast tumors
BREAST.CANCER__CANCERGSE47109246246CANCER23774991BreastPRS is a Gene Expression Assay that Stratifies Intermediate-Risk Oncotype DX Patients into High or Low-Risk for Disease Recurrence
BREAST.CANCER__CANCERGSE58812107107CANCER25887482Gene-expression molecular subtyping of triple-negative breast cancer tumours: importance of immune response
BREAST.CANCER__CANCERGSE26639226226CANCER21631949Expression Data from 226 patients of the REMAGUS02 trial
BREAST.CANCER__CANCERGSE42568121104CANCER23740839Breast Cancer Gene Expression Analysis
BREAST.CANCER__CANCERGSE73076775CANCER-Human body index - transcriptional profiling
BREAST.CANCER__CANCERE-MTAB-154721111CANCER-Inflammatory Breast Cancer
BREAST.CANCER__CANCERGSE287962424CANCER21633166Gene expression profiles of pretreatment biopsies from dose-dense-docetaxel-treated breast cancers
BREAST.CANCER__CANCERGSE1790710912CANCER20932292Molecular profiling of ERBB2-amplified breast cancers
BREAST.CANCER__CANCERGSE127633030CANCER19567590;21673316Gene expression profiling of 30 human breast cancers
BREAST.CANCER__CANCERE-MTAB-3651191494CANCER21785460Transcription profiling by array of breast cancer samples to define breast cancer subsets
BREAST.CANCER__CANCERGSE21653266134CANCER20490655;22110708A gene expression signature identifies two prognostic subgroups of basal breast cancer
BREAST.CANCER__CANCERGSE36771107107CANCER22564725Expression data from primary breast tumors (Auckland)
BREAST.CANCER__CANCERGSE65194178153CANCER25848952;23700430;23144294Expression profiling of breast cancer samples from Institut Curie (Maire cohort) --Affy CDF
BREAST.CANCER__CANCERGSE13787232CANCER19055754Frequent PTEN genomic alterations and activated PI3K pathway in basal-like breast cancer
BREAST.CANCER__CANCERGSE23720370197CANCER21339811;22110708High-resolution comparative genomic hybridization of inflammatory breast cancer and identification of candidate genes
BREAST.CANCER__CANCERGSE288262828CANCER23326553Differentially expressed genes after treatment with chemotherapy in breast cancer and their correlation with pathologic bad response (Miller & Payne grades 1 and 2)
BREAST.CANCER__CANCERGSE110013030CANCER21339180Genome-wide expression profiling from formalin-fixed paraffin-embedded breast cancer core biopsies
BREAST.CANCER__CANCERE-MTAB-10069796CANCER17848951;19010862;20664596;20830311;22353773Comparison of human Inflammatory and non-Inflammatory breast cancer samples
BREAST.CANCER__CANCERGSE177006432CANCER20697068Factorial study for evaluating the effect of Affy platform and lab on gene expression measurements
BREAST.CANCER__CANCERGSE20685327327CANCER21501481Microarray-based molecular subtyping of breast cancer
BREAST.CANCER__CANCERGSE54002433417CANCER25214461Gene expression profiling of LCM captured breast cancer cells
BREAST.CANCER__CANCERGSE220354343CANCER21209903Gene expression data in estrogen receptor alpha positive breast tumors with and without PIK3CA mutations.
BREAST.CANCER__CANCERGSE187286161CANCER20012355Expression data from human breast cancers pre and post chemothrapy
BREAST.CANCER__CANCERGSE79046242CANCER16473279Expression data from human breast tissue
BREAST.CANCER__CANCERGSE1078018542CANCER19266279Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue
BREAST.CANCER__CANCERGSE523223737CANCER16467094Novel linkages between DCE-MRI and genomic profiling in locally advanced and inflammatory breast cancer
BREAST.CANCER__CANCERGSE311923320CANCER23479404Molecular Signature of Pregnancy Associated Breast Cancer (PABC)
BREAST.CANCER__CANCERGSE285832019CANCER23326553Differentially expressed genes after treatment with chemotherapy in breast cancer and their correlation with pathologic mid-response (Miller & Payne grade 3)
BREAST.CANCER__CANCERGSE188648484CANCER20100965;20098429;20189874Tumor expression data from neoadjuvant trial of cisplatin monotherapy in triple negative breast cancer patients
BREAST.CANCER__CANCERGSE163915555CANCER19573224GGI: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial
BREAST.CANCER__CANCERGSE505674135CANCER21196292BRCA1-related gene signature in breast cancer: the role of ER status and molecular type
BREAST.CANCER__CANCERGSE483908181CANCER24098497Concurrent Gene Signatures for Han Chinese Breast Cancers [Affymetrix]
BREAST.CANCER__CANCERE-MTAB-74818246CANCER-Expression and CGH array profiling of ductal carcinoma (135 tumor samples)
BREAST.CANCER__CANCERE-TABM-8548074CANCER-Transcription profiling of human ductal and lobular breast cancers with familial or Cowden disease history.
BREAST.CANCER__CANCERGSE473894747CANCER23993096Towards understanding breast cancer mechanisms to metastasize
BREAST.CANCER__CANCERE-MTAB-5667574CANCER-celecoxib-treated vs control breast tumours
BREAST.CANCER__CANCERGSE23177116116CANCER21116709Prediction of lymph node involvement in breast cancer from primary tumor tissue using gene expression profiling and miRNAs.
BREAST.CANCER__CANCERGSE102813636CANCER19666588Letrozole (Femara) early response to treatment
BREAST.CANCER__CANCERGSE433585757CANCER25412710Transfer of clinically relevant gene expression signatures in breast cancer: from Affymetrix microarray to Illumina RNA-Sequencing technology
BREAST.CANCER__CANCERGSE57643010CANCER17389037Analysis of microdissected invasive lobular and ductal breast carcinomas in relation to normal ductal and lobular cells
BREAST.CANCER__CANCERGSE546012994CANCER18297396Predicting Features of Breast Cancer with Gene Expression Patterns
BREAST.CANCER__NORMALGSE294316612NORMAL--Identifying breast cancer biomarkers
BREAST.CANCER__NORMALGSE20711902NORMAL-21910250Epigenetic portraits of human breast cancers (expression data)
BREAST.CANCER__NORMALGSE21422195NORMAL-21314937Expression profiling of human DCIS and invasive ductal breast carcinoma
BREAST.CANCER__NORMALGSE5400243316NORMAL-25214461Gene expression profiling of LCM captured breast cancer cells
BREAST.CANCER__NORMALGSE264571136NORMAL-23057841;22025034Defining the Genomic Signature of the Parous Breast
BREAST.CANCER__NORMALGSE79046218NORMAL-16473279Expression data from human breast tissue
BREAST.CANCER__NORMALGSE4256812117NORMAL-23740839Breast Cancer Gene Expression Analysis
BREAST.CANCER__NORMALGSE73076779NORMAL--Human body index - transcriptional profiling
BREAST.CANCER__NORMALGSE6519417811NORMAL-25848952;23700430;23144294Expression profiling of breast cancer samples from Institut Curie (Maire cohort) --Affy CDF
BREAST.CANCER__NORMALGSE22544204NORMALO20799942Integration of transcript expression, copy number and LOH analysis of infiltrating ductal carcinoma of the breast: expression analysis
BREAST.CANCER__NORMALGSE30010107107NORMAL--Expression data from breast samples of postmenopausal women
BREAST.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
BREAST.CANCER__NORMALGSE108105827NORMAL-20029976Gene expression signatures in breast cancer distinguish phenotype charact., histological subtypes, and tumor invasivness
BREAST.CANCER__NORMALGSE311923313NORMALO23479404Molecular Signature of Pregnancy Associated Breast Cancer (PABC)
BREAST.CANCER__NORMALGSE57643020NORMAL-17389037Analysis of microdissected invasive lobular and ductal breast carcinomas in relation to normal ductal and lobular cells
BREAST.CANCER__NORMALGSE10780185143NORMAL-19266279Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue
BREAST.CANCER__NORMALE-TABM-2766213NORMALO18339859Transcription profiling of breast tumors and surrounding tissue to detect pre-malignant histological and genetic changes
BREAST.CANCER__NORMALGSE50567416NORMAL-21196292BRCA1-related gene signature in breast cancer: the role of ER status and molecular type
COLON.CANCER__CANCER-LIKEGSE107143316CANCER-LIKE18843029;20087348Expression data from human colonic biopsy sample
COLON.CANCER__CANCER-LIKEGSE15960186CANCER-LIKE20087348Expression data from human colonic epithelial cells normal (N), adenoma (AD) or colorectal cancer (CRC) tissues
COLON.CANCER__CANCER-LIKEGSE373649429CANCER-LIKE25405986Expression data from human colonic biopsy samples (adenoma-carcinoma)
COLON.CANCER__CANCER-LIKEGSE47908606CANCER-LIKE-Transcriptional analysis of left-sided colitis, pancolitis and ulcerative colitis-associated dysplasia
COLON.CANCER__CANCER-LIKEGSE86716424CANCER-LIKE18171984Transcriptome profile of human colorectal adenomas.
COLON.CANCER__CANCERGSE1846284CANCER-Comparison of gene expression profiles between paired primary and metastasis colorectal carcinoma
COLON.CANCER__CANCERGSE10714337CANCER18843029;20087348Expression data from human colonic biopsy sample
COLON.CANCER__CANCERGSE26682331176CANCER21300766;21976543;25342389MRE11 Deficiency Increases Sensitivity to Poly(ADP-ribose) Polymerase Inhibition in Microsatellite Unstable Colorectal Cancers.
COLON.CANCER__CANCERGSE413282010CANCER17160039Colorectal adenocarcinomas and matched normal colonic tissues
COLON.CANCER__CANCERGSE3883212260CANCER25320007NFAT transcriptional activity is associated with metastatic capacity in colon cancer
COLON.CANCER__CANCERGSE287028333CANCER22095227CRC samples for FOLFOX therapy prediction
COLON.CANCER__CANCERGSE403676114CANCER25552933Gene expression analysis of liver and colon cancer primary tumors and metastasis
COLON.CANCER__CANCERGSE1433329087CANCER19996206Expression data from 290 primary colorectal cancers
COLON.CANCER__CANCERGSE305403535CANCER22547595A new classification of chromosome instability (CIN) phenotype, CIN-high and CIN-low
COLON.CANCER__CANCERGSE2091614586CANCER20957034Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data
COLON.CANCER__CANCERGSE331139690CANCER22056143;22496204AMC colon cancer AJCCII
COLON.CANCER__CANCERGSE39582585566CANCER23700391Gene expression Classification of Colon Cancer defines six molecular subtypes with distinct clinical, molecular and survival characteristics [Expression]
COLON.CANCER__CANCERGSE15960186CANCER20087348Expression data from human colonic epithelial cells normal (N), adenoma (AD) or colorectal cancer (CRC) tissues
COLON.CANCER__CANCERGSE39084709CANCER25083765Sporadic early-onset colorectal carcinoma is a distinct clinicopathological and molecular entity
COLON.CANCER__CANCERGSE13294155155CANCER19088021Expression data from primary colorectal cancers
COLON.CANCER__CANCERGSE17537552CANCER19914252;22115830Metastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (VMC Samples)
COLON.CANCER__CANCERGSE17536177114CANCER19914252;22115830Metastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients (Moffitt Samples)
COLON.CANCER__CANCERGSE180885353CANCER21465190Correlation of molecular profiles and clinical outcome of stage UICC II colon cancer patients
COLON.CANCER__CANCERGSE109611818CANCER18827815Gene expression profiling of liver metastases from colorectal cancer
COLON.CANCER__CANCERGSE238785935CANCER21281787Genome Wide Expression Analysis of Middle Eastern Colorectal Cancer Reveals FOXM1 as a Novel Target for Cancer Therapy
COLON.CANCER__CANCERGSE323234417CANCER22399497Screening for Epigenetically Masked Genes in Colorectal Cancer using 5-aza-2’-deoxycytidine treatment, Microarray and Gene Expression Profile
COLON.CANCER__CANCERGSE3789213013CANCER-A seven-gene signature aggregates a subgroup of stage II colon cancers with stage III.
COLON.CANCER__CANCERGSE344893333CANCER22547595A new classification of chromosome instability (CIN) phynotype, CIN-high and CIN-low (validation dataset)
COLON.CANCER__CANCERGSE351446427CANCER22675560Molecular Evaluation of Patient-Derived Colorectal Cancer Explants as a Pre-clinical Mouse Model of Colorectal Cancer
COLON.CANCER__CANCERGSE296216565CANCER22362069mRNA and microRNA profile in colon cancer [mRNA data]
COLON.CANCER__CANCERGSE215101482CANCER21270110Clinical Significance of Osteoprotegerin Expression in Human Colorectal Cancer
COLON.CANCER__CANCERGSE2785411540CANCER23065711Overexpression of NUCKS1 in colorectal cancer correlates with recurrence after curative surgery (gene expression analysis)
COLON.CANCER__CANCERGSE373649427CANCER25405986Expression data from human colonic biopsy samples (adenoma-carcinoma)
COLON.CANCER__CANCERGSE358966262CANCER23272949Gene expression data from 62 colorectal cancers
COLON.CANCER__CANCERGSE93488270CANCER20143136Expression data from healthy controls and early stage CRC patient's tumor
COLON.CANCER__CANCERGSE271571010CANCER22276141Prognostic Significance and Gene Expression Profiles of p53 Mutations in Microsatellite Stable Stage III Colorectal Adenocarcinoma
COLON.CANCER__CANCERGSE198604019CANCER-Prediction of response to FOLFOX
COLON.CANCER__CANCERGSE315953737CANCER-Gene Expression Profiles in Stage II and III Colon Cancer. Application of a 128-gene signature
COLON.CANCER__CANCERGSE13471184CANCER19151715Expression data from human normal pre-frontal cortex, liver, and colon tissues and colon tumors
COLON.CANCER__CANCERGSE41072212CANCER17317818Expression profiling in early onset colorectal cancer
COLON.CANCER__CANCERGSE130677428CANCER19088021Expression data from primary colorectal cancers
COLON.CANCER__CANCERGSE9452261CANCER19177426Definition of an ulcerative colitis preinflammatory state
COLON.CANCER__NORMALGSE1846282NORMAL--Comparison of gene expression profiles between paired primary and metastasis colorectal carcinoma
COLON.CANCER__NORMALGSE10714333NORMAL-18843029;20087348Expression data from human colonic biopsy sample
COLON.CANCER__NORMALGSE92541912NORMAL-18056783Normal human colorectal mucosa, cecum, ascending, transverse, sigmoid and rectum
COLON.CANCER__NORMALGSE413282010NORMAL-17160039Colorectal adenocarcinomas and matched normal colonic tissues
COLON.CANCER__NORMALGSE323234417NORMAL-22399497Screening for Epigenetically Masked Genes in Colorectal Cancer using 5-aza-2’-deoxycytidine treatment, Microarray and Gene Expression Profile
COLON.CANCER__NORMALGSE36807357NORMAL-24155895Genome-wide analysis of Crohn's disease and ulcerative colitis biopsy samples.
COLON.CANCER__NORMALGSE118311717NORMAL-16959948;19603079;19177426Transcription profiling of biopsies from the descending colon of control subjects
COLON.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
COLON.CANCER__NORMALGSE2091614537NORMAL-20957034Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data
COLON.CANCER__NORMALGSE1079121NORMAL-18835392Gene expression profiles in sigmoid colon biopsies from healthy and patients with ulcerative colitis
COLON.CANCER__NORMALGSE479086015NORMAL--Transcriptional analysis of left-sided colitis, pancolitis and ulcerative colitis-associated dysplasia
COLON.CANCER__NORMALGSE33113966NORMAL-22056143;22496204AMC colon cancer AJCCII
COLON.CANCER__NORMALGSE15960186NORMAL-20087348Expression data from human colonic epithelial cells normal (N), adenoma (AD) or colorectal cancer (CRC) tissues
COLON.CANCER__NORMALGSE86716425NORMALO18171984Transcriptome profile of human colorectal adenomas.
COLON.CANCER__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
COLON.CANCER__NORMALGSE238785924NORMAL-21281787Genome Wide Expression Analysis of Middle Eastern Colorectal Cancer Reveals FOXM1 as a Novel Target for Cancer Therapy
COLON.CANCER__NORMALGSE3670122177NORMAL-22684480Gene expression analysis of rectal mucosa in chronic irritable bowel syndrome (IBS) compared to healthy volunteers (HV)
COLON.CANCER__NORMALGSE2151014824NORMAL-21270110Clinical Significance of Osteoprotegerin Expression in Human Colorectal Cancer
COLON.CANCER__NORMALGSE226192010NORMAL-21621540;22826509Genome wide expression data from discordant twins (ulcerative colitis, primary mucosal tissue)
COLON.CANCER__NORMALGSE373649438NORMAL-25405986Expression data from human colonic biopsy samples (adenoma-carcinoma)
COLON.CANCER__NORMALGSE3726766NORMAL--Expression data from human colonic biopsy samples
COLON.CANCER__NORMALGSE133675619NORMALO19834973Genome-wide gene expression analysis of mucosal colonic biopsies and isolated colonocytes...
COLON.CANCER__NORMALGSE93488212NORMAL-20143136Expression data from healthy controls and early stage CRC patient's tumor
COLON.CANCER__NORMALGSE168791336NORMALO19956723Mucosal expression profiling in patients with inflammatory bowel disease before and after first infliximab treatment
COLON.CANCER__NORMALGSE1996394NORMAL--Expression data from hyperplastic polyps and normal colonic mucosa from patients with familial and sporadic HPPS
COLON.CANCER__NORMALGSE9452262NORMALO19177426Definition of an ulcerative colitis preinflammatory state
COLON.CANCER__NORMALGSE13471184NORMAL-19151715Expression data from human normal pre-frontal cortex, liver, and colon tissues and colon tumors
COLON.CANCER__NORMALGSE41072210NORMAL-17317818Expression profiling in early onset colorectal cancer
COLON.CANCER__NORMALGSE387134313NORMAL-23135761Expression data from intestinal mucosa of patients with UC
COLON.CANCER__NORMALE-TABM-17613255NORMALO-Transcription profiling of sigmoid colon mucosal biopsies from irratable bowel syndrome patients and healthy control subjects
ESOPHAGAL.CANCER__CANCER-LIKEGSE268866918CANCER-LIKE23514407Gene expression profiling of Barrett's esophagus, adenocarcinoma, esophageal squamous epithelium and squamous cell carcinoma
ESOPHAGAL.CANCER__CANCERGSE3381032CANCER23894350Expression data of tumor and non-tumor samples from patients with esophageal cancer
ESOPHAGAL.CANCER__CANCERGSE423631414CANCER23525077Exome and whole genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity
ESOPHAGAL.CANCER__CANCERGSE268866930CANCER23514407Gene expression profiling of Barrett's esophagus, adenocarcinoma, esophageal squamous epithelium and squamous cell carcinoma
ESOPHAGAL.CANCER__CANCERGSE17351105CANCER-Expression data from esophageal squamous cell carcinoma (ESCC)
ESOPHAGAL.CANCER__CANCERGSE327014040CANCER21533028Individual aiEMT in surgical samples of esophageal cancer patients
ESOPHAGAL.CANCER__NORMALGSE17351105NORMAL--Expression data from esophageal squamous cell carcinoma (ESCC)
ESOPHAGAL.CANCER__NORMALGSE3381031NORMAL-23894350Expression data of tumor and non-tumor samples from patients with esophageal cancer
ESOPHAGAL.CANCER__NORMALGSE73076773NORMAL--Human body index - transcriptional profiling
ESOPHAGAL.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
GASTRIC.CANCER__CANCERGSE223774343CANCER21701537mRNA expression data from human adenocarcinomas of the stomach
GASTRIC.CANCER__CANCERGSE35809701CANCER22735568Gastric Cancer Subtyping (Australian Patient Cohort)
GASTRIC.CANCER__CANCERGSE1718766CANCER20386750Gene expression analysis of 3 node positive vs 3 node negative intestinal type gastric cancers by gene array technology.
GASTRIC.CANCER__CANCERGSE207082219CANCER20548289Gene expression data from GIST with KIT mutation
GASTRIC.CANCER__CANCERGSE28702833CANCER22095227CRC samples for FOLFOX therapy prediction
GASTRIC.CANCER__CANCERGSE40367611CANCER25552933Gene expression analysis of liver and colon cancer primary tumors and metastasis
GASTRIC.CANCER__CANCERGSE387491515CANCER-Expression data of Human Gastric Adenocarcinoma
GASTRIC.CANCER__CANCERGSE511059494CANCER24658156A signature predicting poor prognosis in gastric and ovarian cancer represents a coordinated macrophage and stromal-response.
GASTRIC.CANCER__CANCERGSE349425656CANCER25053715;23684942Gastric cancer subtyping (Singapore Patient Cohort, batch B)
GASTRIC.CANCER__CANCERGSE177432929CANCER19943934Gene expression profiles differentiating gastrointestinal stromal tumours according to KIT mutations and expression
GASTRIC.CANCER__CANCERGSE62254300300CANCER25894828Molecular analysis of gastric cancer identifies discrete subtypes associated with distinct clinical characteristics and survival outcomes: the ACRG (Asian Cancer Research Group) study [gastric tumors]
GASTRIC.CANCER__CANCERGSE15459200200CANCER19798449;21471434Gastric Cancer Project '08 (Singapore Patient Cohort)
GASTRIC.CANCER__CANCERGSE198262712CANCER21132402Expression data from gastric cancer
GASTRIC.CANCER__CANCERGSE81673231CANCER18757323Distinct gene-expression-defined classes of gastrointestinal stromal tumor (GIST).
GASTRIC.CANCER__CANCERGSE573037070CANCER24935174Expression data from 70 gastric cancer patients
GASTRIC.CANCER__CANCERGSE139116938CANCER19081245Expression data from primary gastric tumors (MSI and MSS) and adjacent normal samples
GASTRIC.CANCER__NORMALGSE730767712NORMAL--Human body index - transcriptional profiling
GASTRIC.CANCER__NORMALGSE78214040NORMAL-19276242;21621540Expression data from human intestinal biopsies
GASTRIC.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
GASTRIC.CANCER__NORMALGSE198262715NORMALO21132402Expression data from gastric cancer
GASTRIC.CANCER__NORMALGSE139116931NORMAL-19081245Expression data from primary gastric tumors (MSI and MSS) and adjacent normal samples
HEAD.AND.NECK.CANCER__CANCER-LIKEGSE3078422916CANCER-LIKE18669583Gene expression profiling of oral squamous cell carcinoma (OSCC)
HEAD.AND.NECK.CANCER__CANCERGSE103004423CANCER19117988head and neck squamous cell carcinoma samples
HEAD.AND.NECK.CANCER__CANCERGSE30784229167CANCER18669583Gene expression profiling of oral squamous cell carcinoma (OSCC)
HEAD.AND.NECK.CANCER__CANCERGSE32923621CANCER16467079;16943533Gene expression signature of HPV in head and neck squamous cell carcinoma
HEAD.AND.NECK.CANCER__CANCERGSE345736415CANCER22815911A Global View of the Oncogenic Landscape in Nasopharyngeal Carcinoma:An Integrated Analysis at the Genetic and Expression Levels
HEAD.AND.NECK.CANCER__CANCERE-TABM-3028270CANCER18679425Transcription profiling of human head and neck squamous cell carcinomas to identify metastasis predictors and descriptors, and differentiation classifiers
HEAD.AND.NECK.CANCER__CANCERGSE124524131CANCER17119049;16912175;22880099mRNA expression profiling of nasopharyngeal carcinoma
HEAD.AND.NECK.CANCER__CANCERGSE67918417CANCER17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
HEAD.AND.NECK.CANCER__NORMALGSE73076776NORMAL--Human body index - transcriptional profiling
HEAD.AND.NECK.CANCER__NORMALGSE34573644NORMAL-22815911A Global View of the Oncogenic Landscape in Nasopharyngeal Carcinoma:An Integrated Analysis at the Genetic and Expression Levels
HEAD.AND.NECK.CANCER__NORMALGSE3078422945NORMAL-18669583Gene expression profiling of oral squamous cell carcinoma (OSCC)
HEAD.AND.NECK.CANCER__NORMALGSE35263534NORMAL-16572319Comparison of gene expression profiles across the normal human body
HEAD.AND.NECK.CANCER__NORMALGSE139338742NORMAL-20443905Trachea Epithelium as a “ Canary” for Cigarette Smoking-induced Biologic Phenotype of Small Airway Epithelium
HEAD.AND.NECK.CANCER__NORMALGSE124524110NORMALO17119049;16912175;22880099mRNA expression profiling of nasopharyngeal carcinoma
HEAD.AND.NECK.CANCER__NORMALGSE43346702NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
HEAD.AND.NECK.CANCER__NORMALGSE6791844NORMAL-17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
HEART.CANCER__NORMALGSE352635311NORMAL-16572319Comparison of gene expression profiles across the normal human body
LIVER.CANCER__CANCER-LIKEGSE67647516CANCER-LIKE17393520Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma
LIVER.CANCER__CANCERGSE6465537CANCER18490075Expression data of Hepatocellular Carcinoma
LIVER.CANCER__CANCERGSE418044020CANCER23426277Hepatic gene expression of HCV related Hepatocellular carcinoma and non-cancerous tissue with Il28B rs8099917 TT genotype and TG/GG genotype
LIVER.CANCER__CANCERGSE622329181CANCER-Large-scale gene expression profiling of 81 hepatocellular carcinomas
LIVER.CANCER__CANCERGSE67647513CANCER17393520Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma
LIVER.CANCER__CANCERGSE175483717CANCER23691139Expression data from cirrhosis and HCC tissue samples
LIVER.CANCER__CANCERGSE196652010CANCER20345479Aberrant DNA methylation in hepatitis B and C virus-related hepatocellular carcinoma
LIVER.CANCER__CANCERGSE62221310CANCER18504433Genome-wide analysis of gene expression patterns in human liver cancers
LIVER.CANCER__CANCERE-MTAB-15034029CANCER-Transcription profiling by array of Pure Fibrolamellar Hepatocellular carcinoma
LIVER.CANCER__CANCERGSE297212010CANCER21747116The landscape of promoter DNA hypomethylation in liver cancer (expression data)
LIVER.CANCER__CANCERGSE3300663CANCER22923518Gene expression profiles from the hepatocellular carcinoma (HCC) tissues
LIVER.CANCER__CANCERGSE5509214049CANCER25141867Viral Expression and Molecular Profiling in Liver Tissue versus Microdissected Hepatocytes in Hepatitis B Virus - Associated Hepatocellular Carcinoma
LIVER.CANCER__CANCERGSE403676132CANCER25552933Gene expression analysis of liver and colon cancer primary tumors and metastasis
LIVER.CANCER__CANCERGSE98439190CANCER18701503;21320499;21324318Gene expression profiling of 91 hepatocellular carcinomas with hepatitis C virus etiology
LIVER.CANCER__CANCERGSE452678732CANCER-Gene expression profiles of human hepatocellular carcinoma (training set 1)
LIVER.CANCER__CANCERGSE287028323CANCER22095227CRC samples for FOLFOX therapy prediction
LIVER.CANCER__CANCERE-MTAB-95028111CANCER-Transcription profiling by array of human normal liver, HBV, HCV and haemochromatosis background cirrhotic and hematocellular carcinoma liver samples.
LIVER.CANCER__NORMALGSE1846282NORMAL--Comparison of gene expression profiles between paired primary and metastasis colorectal carcinoma
LIVER.CANCER__NORMALGSE418044020NORMALO23426277Hepatic gene expression of HCV related Hepatocellular carcinoma and non-cancerous tissue with Il28B rs8099917 TT genotype and TG/GG genotype
LIVER.CANCER__NORMALGSE622329110NORMAL--Large-scale gene expression profiling of 81 hepatocellular carcinomas
LIVER.CANCER__NORMALGSE15239126NORMAL--Expression data from human livers shortly following partial hepatectomy (PHx)
LIVER.CANCER__NORMALGSE2404222NORMAL--Adult human liver tissue expression (Affymetrix)
LIVER.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
LIVER.CANCER__NORMALGSE452678739NORMAL--Gene expression profiles of human hepatocellular carcinoma (training set 1)
LIVER.CANCER__NORMALGSE3859782NORMAL-22677194Gene expression profiling of 6 acute hepatitis C patients
LIVER.CANCER__NORMALGSE297212010NORMAL-21747116The landscape of promoter DNA hypomethylation in liver cancer (expression data)
LIVER.CANCER__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
LIVER.CANCER__NORMALGSE408734949NORMAL-23543312Low SLC22A7 expression in noncancerous liver promotes hepatocellular carcinoma occurrence - a prospective study
LIVER.CANCER__NORMALGSE711784NORMAL-18804985Hepatic gene expression after a hypocaloric, low-fat diet in obese women and controls
LIVER.CANCER__NORMALGSE389412710NORMAL-23185381Liver Regeneration Gene Signature in Hepatitis B virus (HBV)-Associated Acute Liver Failure Identified by Gene Expression Profiling
LIVER.CANCER__NORMALE-MTAB-9502814NORMAL--Transcription profiling by array of human normal liver, HBV, HCV and haemochromatosis background cirrhotic and hematocellular carcinoma liver samples.
LIVER.CANCER__NORMALGSE67647510NORMAL-17393520Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma
LIVER.CANCER__NORMALGSE196652010NORMALO20345479Aberrant DNA methylation in hepatitis B and C virus-related hepatocellular carcinoma
LIVER.CANCER__NORMALGSE23343177NORMAL-21035759Expression data from human liver with or without type 2 diabetes
LIVER.CANCER__NORMALGSE35263533NORMAL-16572319Comparison of gene expression profiles across the normal human body
LIVER.CANCER__NORMALGSE3300663NORMALO22923518Gene expression profiles from the hepatocellular carcinoma (HCC) tissues
LIVER.CANCER__NORMALGSE5509214091NORMALO25141867Viral Expression and Molecular Profiling in Liver Tissue versus Microdissected Hepatocytes in Hepatitis B Virus - Associated Hepatocellular Carcinoma
LIVER.CANCER__NORMALGSE6222132NORMAL-18504433Genome-wide analysis of gene expression patterns in human liver cancers
LIVER.CANCER__NORMALGSE13471185NORMAL-19151715Expression data from human normal pre-frontal cortex, liver, and colon tissues and colon tumors
LIVER.CANCER__NORMALE-MTAB-15034010NORMAL--Transcription profiling by array of Pure Fibrolamellar Hepatocellular carcinoma
LUNG.CANCER__CANCERGSE31210246226CANCER22080568;23028479Gene expression data for pathological stage I-II lung adenocarcinomas
LUNG.CANCER__CANCERGSE28702831CANCER22095227CRC samples for FOLFOX therapy prediction
LUNG.CANCER__CANCERGSE4079119494CANCER23187126Usp44 binds centrin to regulate centrosome positioning and suppress tumorigenesis
LUNG.CANCER__CANCERGSE107991916CANCER19208797Gene expression profile of lung tumors
LUNG.CANCER__CANCERGSE1918815691CANCER20421987Expression data for early stage NSCLC
LUNG.CANCER__CANCERGSE3353210080CANCER-Intratumor heterogeneity of gene expression profiles in early stage non-small cell lung cancer (NSCLC)
LUNG.CANCER__CANCERGSE433467023CANCER23714854Gene repression with H3K27me3 modification in human small cell lung cancer
LUNG.CANCER__CANCERGSE277164040CANCER21911454Expression data from Columbia Lung Adenocarcinoma Human Tumor Cells
LUNG.CANCER__CANCERGSE63074410376CANCER-Expression data from non-small cell lung carcinoma (NSCLC)
LUNG.CANCER__CANCERGSE43580150150CANCER23966112SBV - Gene Expression Profiles of Lung Cancer Tumors - Adenocarcinomas and Squamous Cell Carcinomas
LUNG.CANCER__CANCERGSE126677575CANCER18948947Discovery of somatic mutations in lung adenocarcinomas
LUNG.CANCER__CANCERGSE50081181181CANCER24305008Validation of a histology-independent prognostic gene signature for early stage, non-small cell lung cancer including stage IA patients
LUNG.CANCER__CANCERGSE85815857CANCER18849563Human Chronic Obstructive Pulmonary Disorder (COPD) Biomarker
LUNG.CANCER__CANCERGSE315461717CANCER-UMCCC Primary Lung Cancer Specimens
LUNG.CANCER__CANCERGSE104457272CANCER19176396;20810387MERLION LUNG CANCER STUDY
LUNG.CANCER__CANCERGSE272625025CANCER22726390Gene expression profiling of Non-small cell lung cancer in Taiwan
LUNG.CANCER__CANCERGSE33363105CANCER22392539CD99 is a novel prognostic stromal marker in non-small cell lung cancer
LUNG.CANCER__CANCERE-MTAB-2435957CANCER-LSCC
LUNG.CANCER__CANCERGSE188429191CANCER20878980Gene expression analysis of human lung cancer and control samples
LUNG.CANCER__CANCERGSE1980412060CANCER20802022Genome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan
LUNG.CANCER__CANCERGSE290135555CANCER21742808Robust Gene Expression Signature from Formalin-Fixed Paraffin-Embedded Samples Predicts Prognosis of Non-Small-Cell Lung Cancer Patients
LUNG.CANCER__CANCERGSE141082819CANCER-Brain metastasis from lung adenocarcinoma patients
LUNG.CANCER__CANCERGSE37745196196CANCER23032747Biomarker discovery in non-small cell lung cancer: integrating gene expression profiling, meta-analysis and tissue microarray validation
LUNG.CANCER__CANCERGSE356791313CANCER-lung carcinoid
LUNG.CANCER__CANCERGSE102455858CANCER18486272Gene expression differences between adenocarcinoma and squamous cell carcinoma in human NSCLC
LUNG.CANCER__NORMALGSE50583924NORMAL-17108109;19106307Airway epithelium, small airways, normal non-smokers, phenotypic normal smokers, smokers with COPD and early COPD
LUNG.CANCER__NORMALE-MTAB-172717416NORMAL--CIT_BRON-LBAN-LUTN_109s_EXP_SNP
LUNG.CANCER__NORMALGSE430211828NORMAL-17898169Genome-Wide Profiling of Airway Epithelial Cells in Asthmatics, Smokers and Healthy Controls
LUNG.CANCER__NORMALGSE16538126NORMAL-19218196Genome-wide gene expression profile analysis in pulmonary sarcoidosis
LUNG.CANCER__NORMALGSE3121024620NORMAL-22080568;23028479Gene expression data for pathological stage I-II lung adenocarcinomas
LUNG.CANCER__NORMALGSE143343836NORMAL-19815808;24929828Transcriptomic analysis of human lung development
LUNG.CANCER__NORMALGSE40791194100NORMAL-23187126Usp44 binds centrin to regulate centrosome positioning and suppress tumorigenesis
LUNG.CANCER__NORMALGSE10799193NORMAL-19208797Gene expression profile of lung tumors
LUNG.CANCER__NORMALGSE1918815665NORMAL-20421987Expression data for early stage NSCLC
LUNG.CANCER__NORMALGSE43346702NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
LUNG.CANCER__NORMALGSE1940712737NORMAL-21490961Smoking-induced Wnt pathway downregulation
LUNG.CANCER__NORMALGSE21369295NORMAL-21241464Gene expression profiles of interstitial lung disease (ILD) patients
LUNG.CANCER__NORMALGSE24206236NORMAL-21974901Validated Gene Expression Signatures of Idiopathic Pulmonary Fibrosis
LUNG.CANCER__NORMALGSE73076776NORMAL--Human body index - transcriptional profiling
LUNG.CANCER__NORMALGSE139338714NORMAL-20443905Trachea Epithelium as a “ Canary” for Cigarette Smoking-induced Biologic Phenotype of Small Airway Epithelium
LUNG.CANCER__NORMALGSE100068713NORMAL-18832735Decreased Expression of Intelectin 1 in The Human Airway Epithelium of Smokers Compared to Nonsmokers
LUNG.CANCER__NORMALGSE272625025NORMALO22726390Gene expression profiling of Non-small cell lung cancer in Taiwan
LUNG.CANCER__NORMALGSE30063169135NORMAL-22855713Epithelial Expression of Toll-like Receptor 5 is Modulated in Healthy Smokers and Smokers with Chronic Obstructive Lung Disease
LUNG.CANCER__NORMALGSE3353210020NORMALO-Intratumor heterogeneity of gene expression profiles in early stage non-small cell lung cancer (NSCLC)
LUNG.CANCER__NORMALGSE1980412060NORMALO20802022Genome-wide screening of transcriptional modulation in non-smoking female lung cancer in Taiwan
LUNG.CANCER__NORMALGSE85455435NORMAL-18339782Variability in Small Airway Epithelial Gene Expression Among Normal Smokers
LUNG.CANCER__NORMALGSE22047342196NORMAL-21325429Modulation of Cystatin A Expression in Human Airway Epithelium Related to Genotype, Smoking COPD and Lung Cancer
MENINGIOMA__CANCERE-MTAB-18524315CANCER-High-through put translational in vivo and ex vivo techniques for glioma molecular characterization and accurate classification, prognosis and treatment selection subset data from etumour consorteum Kal1
MENINGIOMA__CANCERGSE165816868CANCER20015288Genomic landscape of meningiomas: gene expression
MENINGIOMA__CANCERGSE94383130CANCER18172325Gene Expression is associated with Progesterone Receptor Status in Meningioma
MESOTHELIOMA.TUMOR__NORMALGSE12345133NORMAL-19753302Global gene expression profiling of human pleural mesotheliomas
NEUROECTODERMAL.TUMOR__NORMALGSE73076778NORMAL--Human body index - transcriptional profiling
ORAL.CANCER__CANCERGSE4274310374CANCER23319825Oral Cavity Cancer Compared to Adjacent "Normal" Tissue [Validation Set]
ORAL.CANCER__CANCERGSE32923615CANCER16467079;16943533Gene expression signature of HPV in head and neck squamous cell carcinoma
ORAL.CANCER__CANCERGSE67918424CANCER17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
ORAL.CANCER__CANCERGSE98443825CANCER18254958Transcriptomic Dissection of Tongue Squamous Cell Carcinoma
ORAL.CANCER__CANCERE-TABM-3028228CANCER18679425Transcription profiling of human head and neck squamous cell carcinomas to identify metastasis predictors and descriptors, and differentiation classifiers
ORAL.CANCER__CANCERGSE416139797CANCER23319825A 13-gene signature prognostic of HPV-negative OSCC: discovery and external validation
ORAL.CANCER__CANCERGSE384943512CANCER25398365Expression data from odontogenic tumours
ORAL.CANCER__NORMALGSE4274310329NORMAL-23319825Oral Cavity Cancer Compared to Adjacent "Normal" Tissue [Validation Set]
ORAL.CANCER__NORMALGSE7224137NORMAL-17620369Gene expression in tonsil and oral epithelia
ORAL.CANCER__NORMALGSE730767719NORMAL--Human body index - transcriptional profiling
ORAL.CANCER__NORMALGSE67918410NORMAL-17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
ORAL.CANCER__NORMALGSE87641313NORMAL-18571147Age and Gender Related Changes in Human Parotid Gland Gene Expression
ORAL.CANCER__NORMALGSE98443811NORMAL-18254958Transcriptomic Dissection of Tongue Squamous Cell Carcinoma
ORAL.CANCER__NORMALGSE425042NORMAL-17075716Determination of expression level of gingiva expressed genes
ORAL.CANCER__NORMALGSE43346702NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
ORAL.CANCER__NORMALGSE1033424764NORMALO18980520Transcriptomes in Healthy and Diseased Gingival Tissues
OVARIAN.CANCER__CANCER-LIKEGSE4149897CANCER-LIKE23128397Profiling of ovarian tumour and benign lesions
OVARIAN.CANCER__CANCERGSE140012320CANCER19525924PAX2: A Potential Biomarker for Low Malignant Potential Ovarian Tumors and Low-Grade Serous Ovarian Carcinomas
OVARIAN.CANCER__CANCERGSE294502010CANCER21754983Identification of Novel Therapeutic Targets in Microdissected Clear Cell Ovarian Cancers
OVARIAN.CANCER__CANCERGSE26193107107CANCER22101765Control of oxidative stress by miRNA and impact on ovarian tumorigenesis
OVARIAN.CANCER__CANCERGSE185206315CANCER19962670Whole-genome oligonucleotide expression analysis of papillary serous ovarian adenocarcinomas
OVARIAN.CANCER__CANCERGSE3206227010CANCER22241791Immune-activation as a therapeutic direction for patients with high-risk ovarian cancer based on gene expression signature (1)
OVARIAN.CANCER__CANCERGSE9890104CANCER18698038Expression profile of 5 ovarian tumour samples (two different cell types from each sample profiles)
OVARIAN.CANCER__CANCERGSE9891285250CANCER18698038Expression profile of 285 ovarian tumour samples
OVARIAN.CANCER__CANCERGSE386664525CANCER23762861Molecular Profiling provides evidence of the existence of two functionally distinct classes of ovarian cancer stroma
OVARIAN.CANCER__CANCERGSE276514935CANCER21451362The Anterior Gradient Homolog 3 (AGR3) Gene Is Associated with Differentiation and Survival in Ovarian Cancer
OVARIAN.CANCER__CANCERGSE15578174CANCER-Expression Data from Ovarian Surface Kinome
OVARIAN.CANCER__CANCERE-MEXP-10854342CANCER-Transcription profiling of human ovarian tumors from the MALOVA (MALignant OVArian) cancer study
OVARIAN.CANCER__CANCERGSE276591010CANCER20802181BRAF Mutation Is Rare in Advanced-Stage Low-Grade Ovarian Serous Carcinomas
OVARIAN.CANCER__CANCERGSE441046060CANCER23934190COL11A1 promotes tumor progression and predicts poor clinical outcome in ovarian cancer.
OVARIAN.CANCER__CANCERGSE392046464CANCER23340297Gene-expression profiles of ascites-cytology-positive ovarian cancer
OVARIAN.CANCER__CANCERGSE63885101101CANCER24478986Gene expression profiling in ovarian cancer
OVARIAN.CANCER__CANCERGSE2056517237CANCER20492709Primary and secondary ovarian tumors
OVARIAN.CANCER__CANCERGSE36668122CANCER23029477Expression data from serous ovarian carcinomas, serous ovarian borderline tumors and surface epithelium scrapings from normal ovaries
OVARIAN.CANCER__CANCERGSE301615858CANCER22348014Genomic Multivariate Predictors of Response to Adjuvant Chemotherapy in Ovarian Carcinoma: Predicting Platinum Resistance
OVARIAN.CANCER__CANCERGSE198297028CANCER20547991A gene expression profile of BRCAness that is associated with outcome in ovarian cancer
OVARIAN.CANCER__CANCERGSE193522820CANCER20179205Activation of phosphatidylcholine-cycle enzymes in human epithelial ovarian cancer cells
OVARIAN.CANCER__CANCERGSE4149891CANCER23128397Profiling of ovarian tumour and benign lesions
OVARIAN.CANCER__CANCERE-MEXP-9352827CANCER17367315Transcription profiling of human ovarian cancer tumor samples to investigate heterogeneity
OVARIAN.CANCER__CANCERGSE121729012CANCER19010816Common activation of RAS_MAPK pathway in serous LMP tumours
OVARIAN.CANCER__CANCERGSE109713713CANCER18593983;21263043Gene expression data from non-malignant fallopian tube epithelium and high grade serous carcinoma.
OVARIAN.CANCER__CANCERGSE405957769CANCER23824740A cancer associated fibroblasts (CAFs) specific gene signature in high grade serous ovarian cancer
OVARIAN.CANCER__NORMALGSE386664520NORMALO23762861Molecular Profiling provides evidence of the existence of two functionally distinct classes of ovarian cancer stroma
OVARIAN.CANCER__NORMALGSE294502010NORMAL-21754983Identification of Novel Therapeutic Targets in Microdissected Clear Cell Ovarian Cancers
OVARIAN.CANCER__NORMALGSE36668124NORMAL-23029477Expression data from serous ovarian carcinomas, serous ovarian borderline tumors and surface epithelium scrapings from normal ovaries
OVARIAN.CANCER__NORMALGSE15578176NORMAL--Expression Data from Ovarian Surface Kinome
OVARIAN.CANCER__NORMALGSE73076777NORMAL--Human body index - transcriptional profiling
OVARIAN.CANCER__NORMALGSE35263531NORMAL-16572319Comparison of gene expression profiles across the normal human body
OVARIAN.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
OVARIAN.CANCER__NORMALGSE40595778NORMAL-23824740A cancer associated fibroblasts (CAFs) specific gene signature in high grade serous ovarian cancer
OVARIAN.CANCER__NORMALGSE280442424NORMALO21744340Expression data from non-malignant fallopian tube epithelium
PANCREATIC.CANCER__CANCERGSE196502215CANCER20955708Expression data from epithelial cells during the process of multistep pancreatic carcinogenesis
PANCREATIC.CANCER__CANCERGSE39409328CANCER-Gene expression profiling of ampullary carcinomas classifies ampullary carcinomas into biliary-like and intestinal-like subtypes that are prognostic of outcome
PANCREATIC.CANCER__CANCERGSE429523333CANCER22925330Molecular markers associated with outcome and metastasis in human pancreatic cancer
PANCREATIC.CANCER__CANCERGSE165155236CANCER19732725Expression data from Mayo Clinic Pancreatic Tumor and Normal samples
PANCREATIC.CANCER__CANCERGSE178916227CANCER21460848Pervasive subtypes of pancreatic ductal adenocarcinoma (PDA) and their differing response to therapy.
PANCREATIC.CANCER__CANCERGSE326763225CANCER22261810Integrative Survival-Based Molecular Profiling of Human Pancreatic Cancer [mRNA]
PANCREATIC.CANCER__CANCERGSE22780168CANCER-Affymetrix Arrays Interrogated with Tumor/Normal Pancreatic Samples
PANCREATIC.CANCER__CANCERGSE154717839CANCER19260470Whole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma
PANCREATIC.CANCER__CANCERE-MEXP-27803130CANCER-Survival in Pancreatic Cancer
PANCREATIC.CANCER__NORMALGSE19650227NORMAL-20955708Expression data from epithelial cells during the process of multistep pancreatic carcinogenesis
PANCREATIC.CANCER__NORMALGSE165155216NORMAL-19732725Expression data from Mayo Clinic Pancreatic Tumor and Normal samples
PANCREATIC.CANCER__NORMALE-MEXP-1140216NORMAL--Transcription profiling of human pancreas from patients with type 1 diabetes (clinical onset and longstanding)
PANCREATIC.CANCER__NORMALGSE32676327NORMAL-22261810Integrative Survival-Based Molecular Profiling of Human Pancreatic Cancer [mRNA]
PANCREATIC.CANCER__NORMALGSE22780168NORMALO-Affymetrix Arrays Interrogated with Tumor/Normal Pancreatic Samples
PANCREATIC.CANCER__NORMALGSE154717839NORMALO19260470Whole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma
PANCREATIC.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
PERITONEAL.CANCER__CANCERGSE9890105CANCER18698038Expression profile of 5 ovarian tumour samples (two different cell types from each sample profiles)
PERITONEAL.CANCER__NORMALE-MTAB-6945821NORMALO-Peritoneal endometriosis
PITUITARY.CANCER__CANCERGSE4237108CANCER-Hussaini-2R01NS035122-06A1
PITUITARY.CANCER__CANCERGSE269662314CANCER21810943Identification of Growth arrest and DNA-damage-inducible gene beta (GADD45beta) as a Novel Tumor Suppressor in Pituitary Gonadotrope Tumors
PITUITARY.CANCER__NORMALGSE35263532NORMAL-16572319Comparison of gene expression profiles across the normal human body
PITUITARY.CANCER__NORMALGSE26966239NORMAL-21810943Identification of Growth arrest and DNA-damage-inducible gene beta (GADD45beta) as a Novel Tumor Suppressor in Pituitary Gonadotrope Tumors
PITUITARY.CANCER__NORMALGSE73076775NORMAL--Human body index - transcriptional profiling
PROSTATE.CANCER__CANCER-LIKEE-MEXP-12438267CANCER-LIKE18596959Transcription profiling by array of human prostate from patients with a previous diagnosis of Prostatic Intraepithelial Neoplasia and following consumption of high glucosinolate broccoli or peas to investigate interactions with the GSTM1 genotype
PROSTATE.CANCER__CANCER-LIKEGSE55945216CANCER-LIKE19737960Gene Expression Profiling of Prostate Benign and Malignant Tissue
PROSTATE.CANCER__CANCER-LIKEGSE3132322CANCER-LIKE-Different expressed genes in epithelium and stromal of Benign Prostatic Hyperplasia
PROSTATE.CANCER__CANCERGSE636922CANCER-Prostate Adenocarcinoma Progression
PROSTATE.CANCER__CANCERE-MEXP-12438214CANCER18596959Transcription profiling by array of human prostate from patients with a previous diagnosis of Prostatic Intraepithelial Neoplasia and following consumption of high glucosinolate broccoli or peas to investigate interactions with the GSTM1 genotype
PROSTATE.CANCER__CANCERGSE30522175CANCER-Transcriptomes of human bladder cells and cells in bladder cancer
PROSTATE.CANCER__CANCERGSE73076778CANCER-Human body index - transcriptional profiling
PROSTATE.CANCER__CANCERGSE17951154109CANCER20663908;21459804Gene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array
PROSTATE.CANCER__CANCERGSE3325192CANCER16286247Integrative Genomic and Proteomic Analysis of Prostate Cancer Reveals Signatures of Metastatic Progression
PROSTATE.CANCER__CANCERGSE324488040CANCER22343836CPDR tumor-benign 80 genechip dataset
PROSTATE.CANCER__CANCERGSE450161110CANCER19956859Expression data from High-grade prostate cancer cells
PROSTATE.CANCER__CANCERGSE559452112CANCER19737960Gene Expression Profiling of Prostate Benign and Malignant Tissue
PROSTATE.CANCER__NORMALGSE30522175NORMAL--Transcriptomes of human bladder cells and cells in bladder cancer
PROSTATE.CANCER__NORMALGSE730767713NORMAL--Human body index - transcriptional profiling
PROSTATE.CANCER__NORMALGSE1795115413NORMALO20663908;21459804Gene expression analysis of prostate cancer samples using Affymetrix U133Plus2 array
PROSTATE.CANCER__NORMALGSE324488040NORMAL-22343836CPDR tumor-benign 80 genechip dataset
PROSTATE.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
PROSTATE.CANCER__NORMALGSE45016111NORMAL-19956859Expression data from High-grade prostate cancer cells
RECTAL.CANCER__CANCER-LIKEGSE8671646CANCER-LIKE18171984Transcriptome profile of human colorectal adenomas.
RECTAL.CANCER__CANCERE-MTAB-23877369CANCER-High-resolution analysis of DNA copy number alterations in rectal cancer
RECTAL.CANCER__CANCERGSE260271212CANCER-Early dynamic transcriptomic changes as predictors of preoperative radiotherapy efficacy in patients with rectal cancer: a feasibility study.
RECTAL.CANCER__CANCERGSE354524645CANCER-Prediction of sensitivity of rectal cancer cells in response to preoperative chemoradiotherapy by DNA microarray analysis of gene expression profiles.
RECTAL.CANCER__CANCERGSE287028323CANCER22095227CRC samples for FOLFOX therapy prediction
RECTAL.CANCER__CANCERGSE1433329039CANCER19996206Expression data from 290 primary colorectal cancers
RECTAL.CANCER__CANCERGSE2091614515CANCER20957034Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data
RECTAL.CANCER__NORMALGSE8671647NORMALO18171984Transcriptome profile of human colorectal adenomas.
RECTAL.CANCER__NORMALGSE9254196NORMAL-18056783Normal human colorectal mucosa, cecum, ascending, transverse, sigmoid and rectum
RECTAL.CANCER__NORMALGSE209161457NORMAL-20957034Modeling oncogenic signaling in colon tumors by multidirectional analyses of microarray data
RENAL.CANCER__CANCERGSE368957629CANCER22683710Molecular Genetic Classification of clear-cell Renal Cell Carcinoma (ccRCC) based on the Gene Expression Profiling of Tumors and Tumorgrafts deficient for BAP1 or PBRM1
RENAL.CANCER__CANCERGSE5375714472CANCER24962026Gene array analysis of clear cell renal cell carcinoma tissue versus matched normal kidney tissue
RENAL.CANCER__CANCERGSE4669913067CANCER24479813;24374825Smoking and Obesity Related Molecular Alterations in Clear Cell Renal Cell Carcinoma
RENAL.CANCER__CANCERGSE4735299CANCER24486593Identification of metastasis associated genes in clear cell renal cell carcinoma
RENAL.CANCER__CANCERGSE143782020CANCER19391132Expression data from pulmonary metastases of clear-cell renal cell carcinoma
RENAL.CANCER__CANCERGSE199823030CANCER20462447Gene expression discriminates chromophobe renal cell carcinoma and oncocytoma
RENAL.CANCER__CANCERE-TABM-2822816CANCER-Transcription profiling of clear cell renal carcinomas and normal kidney cortical tissues
RENAL.CANCER__CANCERGSE19249538CANCER20522636Quantitative Gene Expression Profiling in Formalin-Fixed Paraffin-Embedded Samples by Affymetrix Microarrays
RENAL.CANCER__CANCERE-MTAB-1050554CANCER-Renal Cell Carcinoma (RCC) tumorgrafts exhibit similar gene expression profiling to corresponding primary tumors
RENAL.CANCER__CANCERGSE236293232CANCER20952505Expression data from RCC paired tumors to study metastasis progression
RENAL.CANCER__CANCERGSE111516762CANCER19445733;19680475;20440404Gene expression data from different types of renal tumors and normal kidneys
RENAL.CANCER__CANCERGSE120901818CANCER17145811Gene Expression Profiling Separates Chromophobe Renal Cell Carcinoma from Oncocytoma
RENAL.CANCER__CANCERGSE225416844CANCER22213152Expression data from pulmonary metastases and primary tumors of clear-cell renal cell carcinoma (ccRCC) with different disease-free survivals
RENAL.CANCER__NORMALGSE368957623NORMALO22683710Molecular Genetic Classification of clear-cell Renal Cell Carcinoma (ccRCC) based on the Gene Expression Profiling of Tumors and Tumorgrafts deficient for BAP1 or PBRM1
RENAL.CANCER__NORMALGSE4669913063NORMALO24479813;24374825Smoking and Obesity Related Molecular Alterations in Clear Cell Renal Cell Carcinoma
RENAL.CANCER__NORMALGSE73076778NORMAL--Human body index - transcriptional profiling
RENAL.CANCER__NORMALGSE5375714472NORMAL-24962026Gene array analysis of clear cell renal cell carcinoma tissue versus matched normal kidney tissue
RENAL.CANCER__NORMALE-TABM-2822811NORMAL--Transcription profiling of clear cell renal carcinomas and normal kidney cortical tissues
RENAL.CANCER__NORMALGSE19249538NORMALO20522636Quantitative Gene Expression Profiling in Formalin-Fixed Paraffin-Embedded Samples by Affymetrix Microarrays
RENAL.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
RENAL.CANCER__NORMALE-MTAB-1050552NORMALO-Renal Cell Carcinoma (RCC) tumorgrafts exhibit similar gene expression profiling to corresponding primary tumors
RENAL.CANCER__NORMALGSE11151675NORMAL-19445733;19680475;20440404Gene expression data from different types of renal tumors and normal kidneys
SARCOMA__CANCER-LIKEGSE1331910676CANCER-LIKE19622772Comparison of Human and Rat Uterine Leiomyoma: Identification of a Dysregulated mTOR Pathway
SARCOMA__CANCERGSE373713919CANCER-Expression data from Ewing's sarcoma tumor samples
SARCOMA__CANCERE-TABM-1202102101CANCER-Transcriptional profiling by array of primary rhabdomyosarcoma samples with different PAX3/FOXO1 fusion gene status
SARCOMA__CANCERGSE23980171163CANCER22080063Expression data from human soft tissue sarcomas with complex genomics
SARCOMA__CANCERGSE58697128128CANCER25878329Expression data from 128 Desmoids
SARCOMA__CANCERGSE201963434CANCER20975339Gene expression profile of poorly differentiated synovial sarcoma
SARCOMA__CANCERGSE148272727CANCER20159990;24448647Gene expression profiles from osteosarcpma samples
SARCOMA__CANCERGSE176746244CANCER22084725Inflammatory gene profiling of Ewing sarcoma family of tumors (set B)
SARCOMA__CANCERGSE21050310176CANCER20581836Expression data from Complex genetics sarcomas (cohort 1 and 2)
SARCOMA__CANCERE-MEXP-1922347CANCER19276386Transcription profiling of human well-differentiated leiomyosarcomas and undifferentiated sarcomas
SARCOMA__CANCERGSE34620117117CANCER22327514Expression profiling of Ewing sarcoma samples
SARCOMA__CANCERGSE12102371CANCER19307502Overcoming resistance to conventional drugs in Ewing’s sarcoma and identification of molecular predictors of outcome.
SARCOMA__HISTOLOGICAL_TYPE__ASKINGSE17674621CANCER22084725Inflammatory gene profiling of Ewing sarcoma family of tumors (set B)
SARCOMA__HISTOLOGICAL_TYPE__DESMOIDGSE58697128127CANCER25878329Expression data from 128 Desmoids
SARCOMA__HISTOLOGICAL_TYPE__EWING_SARCOMAGSE34620117116CANCER22327514Expression profiling of Ewing sarcoma samples
SARCOMA__HISTOLOGICAL_TYPE__LEIOMYOSARCOMAGSE2105031084CANCER20581836Expression data from Complex genetics sarcomas (cohort 1 and 2)
SARCOMA__HISTOLOGICAL_TYPE__LEIOMYOSARCOMAE-MEXP-1922349CANCER19276386Transcription profiling of human well-differentiated leiomyosarcomas and undifferentiated sarcomas
SARCOMA__HISTOLOGICAL_TYPE__LIPOSARCOMAGSE2105031061CANCER20581836Expression data from Complex genetics sarcomas (cohort 1 and 2)
SARCOMA__HISTOLOGICAL_TYPE__LIPOSARCOMAGSE163821838CANCER-Expression data from complex genetic sarcomas
SARCOMA__HISTOLOGICAL_TYPE__RHABDOMYOSARCOMAE-TABM-1202102101CANCER-Transcriptional profiling by array of primary rhabdomyosarcoma samples with different PAX3/FOXO1 fusion gene status
SARCOMA__HISTOLOGICAL_TYPE__RHABDOMYOSARCOMAGSE163821837CANCER-Expression data from complex genetic sarcomas
SARCOMA__HISTOLOGICAL_TYPE__SYNOVIAL_SARCOMAGSE201963433CANCER20975339Gene expression profile of poorly differentiated synovial sarcoma
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE91034040NORMAL--Skeletal Muscle Transcript Profiles in Trained or Sedentary Young and Old Subjects
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAE-MEXP-25593630NORMAL-19668377Gene expression profiling in diabetic skeletal muscle
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE194204212NORMAL-22802091Skeletal muscle mitochondrial dysfunction is secondary to T2DM
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE67982913NORMAL-17563058Reduced expression of mitochondrial oxidative metabolism genes in skeletal muscle of women with PCOS
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE289981414NORMALO22052873Human skeletal muscle transcriptional response to exercise
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE730767727NORMAL--Human body index - transcriptional profiling
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE94196665NORMAL-20149619The skeletal muscle transcript profile reflects responses to inadequate protein intake in younger and older males
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE15090155NORMAL-19339494Gene expression profiles in muscle tissue from FSHD patients
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE478818989NORMALO23555298Impact of resistance exercise on human skeletal muscle gene expression - ageing
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE7014366NORMAL-20066428;20971734Expression data from DM1, DM2 and Normal Adult Skeletal Muscle Biopsies
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE341113030NORMAL-22452944Gene expression in skeletal muscle of cancer patients before and after potentially curative surgery
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE35263532NORMAL-16572319Comparison of gene expression profiles across the normal human body
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE13205218NORMAL-18997871Skeletal muscle transcriptome in ICU patients suffering from sepsis induced multiple organ failure
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE124741010NORMALO20803152Microarray analysis of skeletal muscle hypertrophy induced by heat-stress in healthy humans
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE224351710NORMAL-21803291Expression of Splicing Factor Genes is Reduced in Human Obesity and Contributes to Enhanced Lipogenesis
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE28422110110NORMAL-22302958Effects of resistance exercise and resistance training on the skeletal muscle transcriptome in young and old adults
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE242352814NORMAL-21106073Skeletal muscle gene expression in response to resistance exercise: sex specific regulation
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE259413636NORMAL-22302958Effects of age on the skeletal muscle transcriptome
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE356592424NORMAL-20930125A transcriptional map of the impact of endurance exercise training on skeletal muscle phenotype (resting muscle after endurance training)
SARCOMA__NORMAL.OF.LEIOMYOSARCOMAGSE387182222NORMAL-23418191Sex and aging effect on skeletal muscle transcriptome in humans
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE276571818NORMAL-21125211;23264395Human subcutaneous adipose tissue and perithyroid adipose tissue gene expression
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE730767710NORMAL--Human body index - transcriptional profiling
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE27916375375NORMAL-23264395;23511207Human subcutaneous adipose tissue gene expression (SOS Sib-pair study, offspring cohort)
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE171707070NORMAL-19750004A systems genetics approach implicates USF1, FADS3 and other causal candidate genes for familial combined hyperlipidemia
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE9624115NORMAL--Differential gene expression in omental adipose tissue from obese children
SARCOMA__NORMAL.OF.LIPOSARCOMAGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
SARCOMA__NORMAL.OF.SYNOVIAL_SARCOMAGSE73076773NORMAL--Human body index - transcriptional profiling
SKIN.CANCER__CANCERGSE7553872CANCER18442402Gene Expression Patterns Involved in the Malignant Transformation and Progression of Metastatic Melanoma
SKIN.CANCER__CANCERGSE345992121CANCER-In-transit extremity melanoma III
SKIN.CANCER__CANCERGSE73076773CANCER-Human body index - transcriptional profiling
SKIN.CANCER__CANCERGSE3961213836CANCER23223137Distinct gene expression profiles of viral- and non-viral associated Merkel cell carcinoma revealed by transcriptome analysis
SKIN.CANCER__CANCERGSE318793010CANCER-Alterations of methylome and transcriptome in human melanoma: the inverse relationship between epigenome integrity and BRAF mutation
SKIN.CANCER__CANCERGSE192344444CANCER19915147Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival.
SKIN.CANCER__CANCERGSE192935252CANCER20371714In-transit extremity melanoma II
SKIN.CANCER__CANCERGSE233762222CANCER-Gene expression data from stage IV melanoma patients
SKIN.CANCER__CANCERGSE10282433CANCER20371714In-transit extremity melanoma I
SKIN.CANCER__CANCERGSE229682828CANCER21343562Phase II trial melphalan ILI plus ADH-1 for treatment of in-transit extremity melanoma
SKIN.CANCER__CANCERGSE156057458CANCER23633021Transcriptome profiling identifies HMGA2 as a novel gene in melanoma progression
SKIN.CANCER__CANCERGSE356406565CANCER23715562Identification of a predictive gene signature to recMAGE A3 antigen-specific cancer immunotherapy in metastatic melanoma and non-small-cell lung cancer
SKIN.CANCER__NORMALGSE28914258NORMALO23082929Human Skin Transcriptome during Epidermal Wound Healing
SKIN.CANCER__NORMALGSE1335518058NORMAL-19169254;21483750Gene expression data of skin from psoriatic patients and normal controls
SKIN.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
SKIN.CANCER__NORMALGSE342482814NORMAL-23308107Gene expression profiling in psoriatic lesional and non-lesional skin [Set 1]
SKIN.CANCER__NORMALGSE46239524NORMAL--Gene Expression Analysis of Dermatomyositis Skin
SKIN.CANCER__NORMALGSE16161331NORMAL-20004782Broad defects in epidermal cornification in atopic dermatitis (AD) identified through genomic analysis
SKIN.CANCER__NORMALGSE416638115NORMAL-23308107Re-analysis by microarray using cDNA target of samples from psoriasis patients enrolled in an etanercept trial
SKIN.CANCER__NORMALGSE73076777NORMAL--Human body index - transcriptional profiling
SKIN.CANCER__NORMALGSE3961213864NORMAL-23223137Distinct gene expression profiles of viral- and non-viral associated Merkel cell carcinoma revealed by transcriptome analysis
SKIN.CANCER__NORMALGSE329243320NORMALO21388663Nonlesional atopic dermatitis skin is characterized by broad terminal differentiation defects and variable immune abnormalities
SKIN.CANCER__NORMALGSE27887359NORMALO21762976Reversal of Atopic Dermatitis with Narrow-Band UVB Phototherapy and Biomarkers for Therapeutic Response
SKIN.CANCER__NORMALGSE3099917085NORMAL-22763790Expression data from skin biopsy samples from patients with moderate-to-severe psoriasis
SKIN.CANCER__NORMALGSE62813416NORMALO17597826Gene expression time-course in the human skin during elicitation of allergic contact dermatitis
SKIN.CANCER__NORMALGSE32887315NORMAL-21924794Molecular profiling and gene expression analysis in cutaneous sarcoidosis (CS)
SKIN.CANCER__NORMALGSE149058249NORMAL-18648529Type I Interferon: Potential Therapeutic Target for Psoriasis?
SKIN.CANCER__NORMALGSE156057416NORMAL-23633021Transcriptome profiling identifies HMGA2 as a novel gene in melanoma progression
SMALL.INTESTINE.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
SMALL.INTESTINE.CANCER__NORMALGSE73076776NORMAL--Human body index - transcriptional profiling
SMALL.INTESTINE.CANCER__NORMALGSE168791336NORMALO19956723Mucosal expression profiling in patients with inflammatory bowel disease before and after first infliximab treatment
SMALL.INTESTINE.CANCER__NORMALGSE9576122NORMAL-18953328Gene expression profiling of classical midgut carcinoid primary tumors and liver metastasis
SPLEEN__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
SPLEEN__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
TESTIS.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
TESTIS.CANCER__NORMALGSE73076775NORMAL--Human body index - transcriptional profiling
THYROID.CANCER__CANCER-LIKEE-MEXP-24427033CANCER-LIKE20668010Transcription profiling of human thyroid gland cells to find molecular signatures of thyroid follicular neoplasia
THYROID.CANCER__CANCERGSE3467189CANCER16365291The role of micro-RNA genes in papillary thyroid carcinoma
THYROID.CANCER__CANCERGSE3363010560CANCER22266856;22828612Normal thyrocytes vs papillary vs anaplastic thyroid carcinomas
THYROID.CANCER__CANCERGSE60041814CANCER17296934Gene Expression and Functional Evidence of Epithelial-to-Mesenchymal Transition in Papillary Thyroid Cancer Invasion
THYROID.CANCER__CANCERGSE292654929CANCER-Sporadic vs. Post-Chernobyl Papillary vs. Anaplastic Thyroid Cancers
THYROID.CANCER__CANCERE-MEXP-24427024CANCER20668010Transcription profiling of human thyroid gland cells to find molecular signatures of thyroid follicular neoplasia
THYROID.CANCER__CANCERGSE3678147CANCER-PTC versus paired normal thyroid tissue
THYROID.CANCER__NORMALGSE3467189NORMALO16365291The role of micro-RNA genes in papillary thyroid carcinoma
THYROID.CANCER__NORMALGSE3363010545NORMAL-22266856;22828612Normal thyrocytes vs papillary vs anaplastic thyroid carcinomas
THYROID.CANCER__NORMALGSE6004184NORMALO17296934Gene Expression and Functional Evidence of Epithelial-to-Mesenchymal Transition in Papillary Thyroid Cancer Invasion
THYROID.CANCER__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
THYROID.CANCER__NORMALGSE292654920NORMALO-Sporadic vs. Post-Chernobyl Papillary vs. Anaplastic Thyroid Cancers
THYROID.CANCER__NORMALE-MEXP-2442702NORMAL-20668010Transcription profiling of human thyroid gland cells to find molecular signatures of thyroid follicular neoplasia
THYROID.CANCER__NORMALGSE43346702NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
THYROID.CANCER__NORMALGSE3678147NORMALO-PTC versus paired normal thyroid tissue
URETER.CANCER__CANCERGSE311899251CANCER23097579Molecular Biomarker Signature for Bladder Cancer Detection
URETER.CANCER__NORMALGSE311899240NORMAL-23097579Molecular Biomarker Signature for Bladder Cancer Detection
URETER.CANCER__NORMALGSE73076774NORMAL--Human body index - transcriptional profiling
UTERINE.CANCER__CANCER-LIKEGSE48882712CANCER-LIKE16306079Molecular phenotyping of human endometrium
UTERINE.CANCER__CANCERGSE989128533CANCER18698038Expression profile of 285 ovarian tumour samples
UTERINE.CANCER__CANCERGSE560267563CANCER25267067Gene expression in human endometrial cancer tissues and serous papillary endometrial cancer cell line, SPAC-1L, treated by STAT1-siRNA and/or IFN-gamma
UTERINE.CANCER__CANCERGSE265113939CANCER21385933Involvement of the TGF-β and β-catenin pathways in pelvic lymph node metastasis in early stage cervical cancer
UTERINE.CANCER__CANCERGSE2943688CANCER-Progesterone inhibits epithelial-to-mesenchymal transition in endometrial cancer: patient data
UTERINE.CANCER__CANCERGSE67918420CANCER17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
UTERINE.CANCER__CANCERGSE276787728CANCER17516585;21952923;23765377Gene expression analysis in a variety of normal, premalignant and squamous cell carcinomas of the cervix
UTERINE.CANCER__CANCERGSE57873333CANCER17020965Survey of Intra- and Inter-Tumour Heterogeneity of Gene Expression in Cervical Cancer
UTERINE.CANCER__CANCERGSE180962718CANCER22343407Identifying the molecular signature of the t(12;14) subgroup of uterine leiomyomata using a paired analysis
UTERINE.CANCER__CANCERGSE17025103103CANCER21619611Gene Expression Analysis of Stage I Endometrial Cancers
UTERINE.CANCER__NORMALGSE63643716NORMAL-17510236Gene Profiling of Endometrium Reveals Progesterone Resistance and Candidate Genetic Loci in Women with Endometriosis
UTERINE.CANCER__NORMALGSE299812020NORMAL--Expression data from human endometrium
UTERINE.CANCER__NORMALGSE7305201NORMAL-17640886Human endometriosis vs normal endometrium study - transcriptional profiling
UTERINE.CANCER__NORMALGSE7846104NORMAL-17956924Differentially expressed genes in HEECs of eutopic endometrium of patients with endometriosis compared with control
UTERINE.CANCER__NORMALGSE730767728NORMAL--Human body index - transcriptional profiling
UTERINE.CANCER__NORMALGSE6791848NORMAL-17510386Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers
UTERINE.CANCER__NORMALGSE27678773NORMAL-17516585;21952923;23765377Gene expression analysis in a variety of normal, premalignant and squamous cell carcinomas of the cervix
UTERINE.CANCER__NORMALGSE43346701NORMAL-23714854Gene repression with H3K27me3 modification in human small cell lung cancer
UVEAL.MELANOMA__CANCERGSE278312928CANCER22267972Syntenin-1 is expressed in uveal melanoma and correlates with metastatic progression
VULVAR.CANCER__CANCER-LIKEGSE5563198CANCER-LIKE17471573;21815142Gene expression profile of VIN lesions in comparison to controls
VULVAR.CANCER__NORMALGSE73076777NORMAL--Human body index - transcriptional profiling
VULVAR.CANCER__NORMALGSE55631910NORMAL-17471573;21815142Gene expression profile of VIN lesions in comparison to controls
Made by ./make_report_for_oncopression_dataset.py